Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 AL157400.5-201ENST00000507624 621 ntBASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SPTSSBQ8NFR3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SPTSSBQ8NFR3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms