Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 AP006587.1-201ENST00000534129 1502 ntBASIC17.1■□□□□ 0.33
CPEB3Q8NE35 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPEB3Q8NE35 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 AC128676.1-201ENST00000454392 318 ntBASIC17.09■□□□□ 0.33
CPEB3Q8NE35 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.09■□□□□ 0.33
CPEB3Q8NE35 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPEB3Q8NE35 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CPEB3Q8NE35 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.08■□□□□ 0.32
CPEB3Q8NE35 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
CPEB3Q8NE35 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 PRKY-204ENST00000533551 1019 ntBASIC17.07■□□□□ 0.32
CPEB3Q8NE35 RN7SL471P-201ENST00000580476 299 ntBASIC17.07■□□□□ 0.32
CPEB3Q8NE35 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 AL023875.1-201ENST00000640777 796 ntBASIC17.07■□□□□ 0.32
CPEB3Q8NE35 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPEB3Q8NE35 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms