Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 KRT16P6-202ENST00000425692 1426 ntBASIC19.08■□□□□ 0.65
CPSF7Q8N684 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CPSF7Q8N684 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPSF7Q8N684 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPSF7Q8N684 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.08■□□□□ 0.64
CPSF7Q8N684 CROCCP3-202ENST00000420820 1947 ntBASIC19.08■□□□□ 0.64
CPSF7Q8N684 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 MIPEPP3-201ENST00000412105 444 ntBASIC19.07■□□□□ 0.64
CPSF7Q8N684 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPSF7Q8N684 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.07■□□□□ 0.64
CPSF7Q8N684 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 CYP21A1P-202ENST00000354927 1481 ntBASIC19.06■□□□□ 0.64
CPSF7Q8N684 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 AL591742.1-201ENST00000604433 565 ntBASIC19.06■□□□□ 0.64
CPSF7Q8N684 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.06■□□□□ 0.64
CPSF7Q8N684 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPSF7Q8N684 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 AC073210.2-201ENST00000430369 194 ntBASIC19.05■□□□□ 0.64
CPSF7Q8N684 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 MIR4758-201ENST00000577688 71 ntBASIC19.05■□□□□ 0.64
CPSF7Q8N684 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms