Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB42Q8N4Z0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.05■□□□□ 0.64
RAB42Q8N4Z0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RPPH1-201ENST00000516869 333 ntBASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 AC124016.1-201ENST00000609552 612 ntBASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB42Q8N4Z0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 AC142381.4-202ENST00000563973 229 ntBASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB42Q8N4Z0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 PRORSD1P-201ENST00000295112 541 ntBASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB42Q8N4Z0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB42Q8N4Z0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 KRT16P5-201ENST00000455284 522 ntBASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB42Q8N4Z0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms