Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 POM121L13P-201ENST00000422362 380 ntBASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 AL121829.2-201ENST00000620908 328 ntBASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 AP006587.1-201ENST00000534129 1502 ntBASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC116Q8IYX3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 AP003097.1-201ENST00000530657 1135 ntBASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC116Q8IYX3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CCDC116Q8IYX3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC116Q8IYX3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC116Q8IYX3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 AC026366.1-201ENST00000488803 879 ntBASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 AC079416.2-201ENST00000625035 1193 ntBASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC116Q8IYX3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms