Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.21■■□□□ 1.47
DDX60Q8IY21 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.2■■□□□ 1.47
DDX60Q8IY21 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.2■■□□□ 1.47
DDX60Q8IY21 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX60Q8IY21 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX60Q8IY21 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX60Q8IY21 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC24.2■■□□□ 1.46
DDX60Q8IY21 AK4P3-201ENST00000418260 669 ntBASIC24.2■■□□□ 1.46
DDX60Q8IY21 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.2■■□□□ 1.46
DDX60Q8IY21 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.2■■□□□ 1.46
DDX60Q8IY21 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX60Q8IY21 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.2■■□□□ 1.46
DDX60Q8IY21 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX60Q8IY21 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX60Q8IY21 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.2■■□□□ 1.46
DDX60Q8IY21 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX60Q8IY21 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX60Q8IY21 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
DDX60Q8IY21 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX60Q8IY21 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX60Q8IY21 AC063952.2-201ENST00000498792 1227 ntBASIC24.19■■□□□ 1.46
DDX60Q8IY21 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX60Q8IY21 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX60Q8IY21 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
DDX60Q8IY21 AL162377.1-201ENST00000618844 1793 ntBASIC24.19■■□□□ 1.46
DDX60Q8IY21 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX60Q8IY21 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.18■■□□□ 1.46
DDX60Q8IY21 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 GABARAPL3-202ENST00000624044 1851 ntBASIC24.18■■□□□ 1.46
DDX60Q8IY21 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX60Q8IY21 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX60Q8IY21 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX60Q8IY21 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX60Q8IY21 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 YBX1P2-201ENST00000489612 999 ntBASIC24.18■■□□□ 1.46
DDX60Q8IY21 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX60Q8IY21 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.18■■□□□ 1.46
DDX60Q8IY21 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.17■■□□□ 1.46
DDX60Q8IY21 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.17■■□□□ 1.46
DDX60Q8IY21 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX60Q8IY21 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX60Q8IY21 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
DDX60Q8IY21 AL138966.2-201ENST00000621997 464 ntBASIC24.16■■□□□ 1.46
DDX60Q8IY21 AC010653.2-201ENST00000623505 997 ntBASIC24.16■■□□□ 1.46
DDX60Q8IY21 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX60Q8IY21 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
DDX60Q8IY21 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX60Q8IY21 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX60Q8IY21 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX60Q8IY21 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.16■■□□□ 1.46
DDX60Q8IY21 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 CCR12P-201ENST00000446203 998 ntBASIC24.15■■□□□ 1.46
DDX60Q8IY21 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms