Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 AC112907.3-201ENST00000577781 2400 ntBASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN4BQ8IWT1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 REXO1L10P-201ENST00000615707 1290 ntBASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN4BQ8IWT1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 AC211429.1-201ENST00000415277 523 ntBASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 ECEL1P3-201ENST00000427961 737 ntBASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 AL445675.2-201ENST00000620291 557 ntBASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 AL031985.4-201ENST00000642138 673 ntBASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN4BQ8IWT1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 AC009237.14-201ENST00000609975 1594 ntBASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 KRT8P8-201ENST00000434750 1448 ntBASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SCN4BQ8IWT1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 RBM17P1-201ENST00000453646 1190 ntBASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms