Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 AC012306.2-201ENST00000609350 630 ntBASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 AC131212.4-201ENST00000623606 975 ntBASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC60Q8IWA6 FSCN1P1-201ENST00000568912 1481 ntBASIC21.77■■□□□ 1.07
CCDC60Q8IWA6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 MIR1238-201ENST00000408483 83 ntBASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC60Q8IWA6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 LINC01465-201ENST00000408887 1940 ntBASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 AC097493.4-201ENST00000641197 219 ntBASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.75■■□□□ 1.07
CCDC60Q8IWA6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 FITM1-202ENST00000559294 800 ntBASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 RCC2P6-201ENST00000526625 1557 ntBASIC21.74■■□□□ 1.07
CCDC60Q8IWA6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 AC008040.2-201ENST00000461049 708 ntBASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 Z85996.1-201ENST00000494644 937 ntBASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC60Q8IWA6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms