Protein–RNA interactions for Protein: Q8IVH2

FOXP4, Forkhead box protein P4, humanhuman

Predicted RBP Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4Q8IVH2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 AC130371.2-201ENST00000619443 611 ntBASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 AC020907.5-201ENST00000624372 1936 ntBASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXP4Q8IVH2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 DGCR10-201ENST00000609839 495 ntBASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
FOXP4Q8IVH2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 KRT18P22-201ENST00000402024 1347 ntBASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXP4Q8IVH2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 AP005242.2-201ENST00000580065 1175 ntBASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 HLA-A-209ENST00000638375 975 ntBASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 AC092865.7-201ENST00000641832 219 ntBASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOXP4Q8IVH2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 AL162377.1-201ENST00000618844 1793 ntBASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 TMPOP1-202ENST00000424642 1267 ntBASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXP4Q8IVH2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 AP001271.2-201ENST00000624018 1556 ntBASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXP4Q8IVH2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.14■■□□□ 1.29
FOXP4Q8IVH2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms