Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH24Q86UP0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH24Q86UP0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH24Q86UP0 RPS2P55-201ENST00000397318 883 ntBASIC17.86■□□□□ 0.45
CDH24Q86UP0 RCN1P1-201ENST00000400413 996 ntBASIC17.86■□□□□ 0.45
CDH24Q86UP0 AC087499.1-201ENST00000418141 1075 ntBASIC17.86■□□□□ 0.45
CDH24Q86UP0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH24Q86UP0 AC107956.1-201ENST00000494359 873 ntBASIC17.86■□□□□ 0.45
CDH24Q86UP0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.86■□□□□ 0.45
CDH24Q86UP0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH24Q86UP0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH24Q86UP0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH24Q86UP0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.85■□□□□ 0.45
CDH24Q86UP0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CDH24Q86UP0 AL589743.5-201ENST00000616611 1050 ntBASIC17.85■□□□□ 0.45
CDH24Q86UP0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH24Q86UP0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 MIR4785-201ENST00000585005 73 ntBASIC17.84■□□□□ 0.45
CDH24Q86UP0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 AP001412.1-201ENST00000608405 714 ntBASIC17.84■□□□□ 0.45
CDH24Q86UP0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH24Q86UP0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 PLK5-205ENST00000642079 1969 ntBASIC17.84■□□□□ 0.45
CDH24Q86UP0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH24Q86UP0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH24Q86UP0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH24Q86UP0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.83■□□□□ 0.45
CDH24Q86UP0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDH24Q86UP0 AC020907.5-201ENST00000624372 1936 ntBASIC17.83■□□□□ 0.44
CDH24Q86UP0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH24Q86UP0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDH24Q86UP0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CDH24Q86UP0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CDH24Q86UP0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH24Q86UP0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH24Q86UP0 AL158211.5-201ENST00000623583 2518 ntBASIC17.82■□□□□ 0.44
CDH24Q86UP0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDH24Q86UP0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms