Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 AC068338.2-201ENST00000563278 1430 ntBASIC17.64■□□□□ 0.41
SHFQ7M4L6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 AP001271.2-201ENST00000624018 1556 ntBASIC17.63■□□□□ 0.41
SHFQ7M4L6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 KRT18P68-201ENST00000392293 1000 ntBASIC17.63■□□□□ 0.41
SHFQ7M4L6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 KRT18P5-201ENST00000436075 1291 ntBASIC17.63■□□□□ 0.41
SHFQ7M4L6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 AC105020.6-201ENST00000621523 1217 ntBASIC17.63■□□□□ 0.41
SHFQ7M4L6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHFQ7M4L6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.63■□□□□ 0.41
SHFQ7M4L6 KRT8P20-201ENST00000423953 1409 ntBASIC17.63■□□□□ 0.41
SHFQ7M4L6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 DUX4L16-201ENST00000555130 1264 ntBASIC17.62■□□□□ 0.41
SHFQ7M4L6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 AC069236.1-201ENST00000604339 616 ntBASIC17.62■□□□□ 0.41
SHFQ7M4L6 AC008694.1-202ENST00000636953 945 ntBASIC17.62■□□□□ 0.41
SHFQ7M4L6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SHFQ7M4L6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHFQ7M4L6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 CNN2P6-201ENST00000439038 900 ntBASIC17.61■□□□□ 0.41
SHFQ7M4L6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.61■□□□□ 0.41
SHFQ7M4L6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHFQ7M4L6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms