Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RTL4Q6ZR62 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 HCG11-201ENST00000411553 5696 ntBASIC18.3■□□□□ 0.52
RTL4Q6ZR62 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RTL4Q6ZR62 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 AC133681.1-201ENST00000465482 601 ntBASIC18.29■□□□□ 0.52
RTL4Q6ZR62 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 AC124016.1-201ENST00000609552 612 ntBASIC18.29■□□□□ 0.52
RTL4Q6ZR62 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL4Q6ZR62 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 KRASP1-201ENST00000407852 552 ntBASIC18.28■□□□□ 0.52
RTL4Q6ZR62 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 KRT16P6-202ENST00000425692 1426 ntBASIC18.28■□□□□ 0.52
RTL4Q6ZR62 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 AC124283.5-201ENST00000624661 1809 ntBASIC18.28■□□□□ 0.52
RTL4Q6ZR62 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL4Q6ZR62 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTL4Q6ZR62 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTL4Q6ZR62 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
RTL4Q6ZR62 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms