Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 AL109923.1-201ENST00000618799 583 ntBASIC22.06■■□□□ 1.12
SHC4Q6S5L8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHC4Q6S5L8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.05■■□□□ 1.12
SHC4Q6S5L8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 ZNF815P-204ENST00000434898 1737 ntBASIC22.05■■□□□ 1.12
SHC4Q6S5L8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHC4Q6S5L8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 TEX21P-204ENST00000641479 1693 ntBASIC22.04■■□□□ 1.12
SHC4Q6S5L8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHC4Q6S5L8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 AC093503.3-201ENST00000624917 2352 ntBASIC22.03■■□□□ 1.12
SHC4Q6S5L8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 AC069152.1-201ENST00000438030 544 ntBASIC22.03■■□□□ 1.12
SHC4Q6S5L8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 AC142086.2-201ENST00000569753 217 ntBASIC22.03■■□□□ 1.12
SHC4Q6S5L8 AC104771.1-201ENST00000603335 964 ntBASIC22.03■■□□□ 1.12
SHC4Q6S5L8 AC120498.8-201ENST00000614275 531 ntBASIC22.03■■□□□ 1.12
SHC4Q6S5L8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.03■■□□□ 1.12
SHC4Q6S5L8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC4Q6S5L8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
SHC4Q6S5L8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SHC4Q6S5L8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.01■■□□□ 1.11
SHC4Q6S5L8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms