Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 AC098818.2-201ENST00000564925 2320 ntBASIC19.91■□□□□ 0.78
CASC4Q6P4E1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 AP000974.1-201ENST00000623909 2387 ntBASIC19.9■□□□□ 0.78
CASC4Q6P4E1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 AC006970.2-201ENST00000450065 779 ntBASIC19.9■□□□□ 0.78
CASC4Q6P4E1 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 AC018553.1-201ENST00000616682 1458 ntBASIC19.9■□□□□ 0.78
CASC4Q6P4E1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASC4Q6P4E1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CASC4Q6P4E1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 AL390719.1-204ENST00000412397 1219 ntBASIC19.89■□□□□ 0.77
CASC4Q6P4E1 CROCCP5-201ENST00000436658 830 ntBASIC19.89■□□□□ 0.77
CASC4Q6P4E1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.89■□□□□ 0.77
CASC4Q6P4E1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASC4Q6P4E1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 RNF165-205ENST00000588679 2904 ntBASIC19.88■□□□□ 0.77
CASC4Q6P4E1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASC4Q6P4E1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms