Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCRAQ6ISU1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 HBZP1-201ENST00000354915 429 ntBASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 EMBP1-201ENST00000458200 901 ntBASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 MIR3180-1-201ENST00000580374 94 ntBASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 MIR3180-3-201ENST00000584616 94 ntBASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 AL031008.1-201ENST00000619963 541 ntBASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 C9orf163-202ENST00000624034 2573 ntBASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCRAQ6ISU1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 BX276092.5-203ENST00000456199 560 ntBASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 AL121672.3-201ENST00000608644 468 ntBASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCRAQ6ISU1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 NUS1P1-201ENST00000446295 882 ntBASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 AL121603.2-201ENST00000557373 2117 ntBASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCRAQ6ISU1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 PHGDH-210ENST00000641115 1638 ntBASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 AL160237.2-201ENST00000556165 472 ntBASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 AL160286.2-201ENST00000567150 934 ntBASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 AC016734.2-201ENST00000624325 1377 ntBASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCRAQ6ISU1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 AC011498.5-201ENST00000592027 486 ntBASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 AC104692.2-201ENST00000603054 253 ntBASIC20.16■□□□□ 0.82
PTCRAQ6ISU1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms