Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 LINC00167-201ENST00000530583 1419 ntBASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 GK-202ENST00000378941 458 ntTSL 3 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 AC027601.4-201ENST00000611259 610 ntBASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 HLA-A-209ENST00000638375 975 ntBASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
COL13A1Q5TAT6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL13A1Q5TAT6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.14■■□□□ 1.14
COL13A1Q5TAT6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
COL13A1Q5TAT6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 DNAJB3-201ENST00000446806 729 ntBASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 AL136038.4-201ENST00000603606 1261 ntBASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 MIR7706-201ENST00000613747 67 ntBASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
COL13A1Q5TAT6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 TUBB8P6-201ENST00000436895 1288 ntBASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL13A1Q5TAT6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 AC138932.3-201ENST00000567634 1902 ntBASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 AC026471.6-201ENST00000622954 1905 ntBASIC22.12■■□□□ 1.13
COL13A1Q5TAT6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 ABCB10P4-201ENST00000566803 2184 ntBASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 SPCS2P1-201ENST00000561636 679 ntBASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 AL596442.2-201ENST00000610240 980 ntBASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 FAM197Y3-203ENST00000618346 717 ntBASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.11■■□□□ 1.13
COL13A1Q5TAT6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
COL13A1Q5TAT6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms