Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
LDLRAP1Q5SW96 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAP1Q5SW96 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 AL158047.1-201ENST00000445918 881 ntBASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.43■□□□□ 0.7
LDLRAP1Q5SW96 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 KRT16P5-201ENST00000455284 522 ntBASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 PCDHAC2-203ENST00000615316 3011 ntBASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAP1Q5SW96 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms