Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 TFP1-202ENST00000475455 1573 ntBASIC18.83■□□□□ 0.6
HMGCS1Q01581 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 AC073210.2-201ENST00000430369 194 ntBASIC18.82■□□□□ 0.6
HMGCS1Q01581 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCS1Q01581 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS1Q01581 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 ID1-201ENST00000376105 1233 ntBASIC18.81■□□□□ 0.6
HMGCS1Q01581 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.81■□□□□ 0.6
HMGCS1Q01581 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS1Q01581 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMGCS1Q01581 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 HLA-L-209ENST00000420110 1011 ntBASIC18.8■□□□□ 0.6
HMGCS1Q01581 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 AL109923.1-201ENST00000618799 583 ntBASIC18.8■□□□□ 0.6
HMGCS1Q01581 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGCS1Q01581 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS1Q01581 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 TNXA-203ENST00000507684 2038 ntBASIC18.79■□□□□ 0.6
HMGCS1Q01581 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 AC004408.2-201ENST00000623613 2777 ntBASIC18.79■□□□□ 0.6
HMGCS1Q01581 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 AC098934.4-201ENST00000564127 592 ntBASIC18.79■□□□□ 0.6
HMGCS1Q01581 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 MIR4758-201ENST00000577688 71 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms