Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.07■□□□□ 0.64
YBX1P67809 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
YBX1P67809 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 TMEM179-206ENST00000616017 1645 ntBASIC19.07■□□□□ 0.64
YBX1P67809 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
YBX1P67809 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.06■□□□□ 0.64
YBX1P67809 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.06■□□□□ 0.64
YBX1P67809 KRT18P29-201ENST00000397031 1267 ntBASIC19.06■□□□□ 0.64
YBX1P67809 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.06■□□□□ 0.64
YBX1P67809 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.06■□□□□ 0.64
YBX1P67809 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
YBX1P67809 MTDHP1-201ENST00000605323 784 ntBASIC19.06■□□□□ 0.64
YBX1P67809 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.06■□□□□ 0.64
YBX1P67809 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
YBX1P67809 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.06■□□□□ 0.64
YBX1P67809 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
YBX1P67809 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YBX1P67809 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.06■□□□□ 0.64
YBX1P67809 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.06■□□□□ 0.64
YBX1P67809 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
YBX1P67809 AC116351.2-201ENST00000606540 1585 ntBASIC19.06■□□□□ 0.64
YBX1P67809 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
YBX1P67809 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
YBX1P67809 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
YBX1P67809 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.05■□□□□ 0.64
YBX1P67809 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.05■□□□□ 0.64
YBX1P67809 AC098590.1-201ENST00000468126 897 ntBASIC19.05■□□□□ 0.64
YBX1P67809 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
YBX1P67809 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
YBX1P67809 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.05■□□□□ 0.64
YBX1P67809 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.05■□□□□ 0.64
YBX1P67809 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
YBX1P67809 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.05■□□□□ 0.64
YBX1P67809 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YBX1P67809 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.05■□□□□ 0.64
YBX1P67809 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.04■□□□□ 0.64
YBX1P67809 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.04■□□□□ 0.64
YBX1P67809 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 TFP1-202ENST00000475455 1573 ntBASIC19.04■□□□□ 0.64
YBX1P67809 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.04■□□□□ 0.64
YBX1P67809 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
YBX1P67809 AL023875.1-201ENST00000640777 796 ntBASIC19.04■□□□□ 0.64
YBX1P67809 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
YBX1P67809 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.04■□□□□ 0.64
YBX1P67809 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.04■□□□□ 0.64
YBX1P67809 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
YBX1P67809 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
YBX1P67809 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.03■□□□□ 0.64
YBX1P67809 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
YBX1P67809 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
YBX1P67809 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.03■□□□□ 0.64
YBX1P67809 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.03■□□□□ 0.64
YBX1P67809 RN7SL471P-201ENST00000580476 299 ntBASIC19.03■□□□□ 0.64
YBX1P67809 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
YBX1P67809 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
YBX1P67809 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
YBX1P67809 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms