Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAD23BP54727 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.88■□□□□ 0.93
RAD23BP54727 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RAD23BP54727 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.88■□□□□ 0.93
RAD23BP54727 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.88■□□□□ 0.93
RAD23BP54727 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.88■□□□□ 0.93
RAD23BP54727 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAD23BP54727 TREX1-205ENST00000625293 1783 ntBASIC20.88■□□□□ 0.93
RAD23BP54727 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAD23BP54727 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.88■□□□□ 0.93
RAD23BP54727 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.88■□□□□ 0.93
RAD23BP54727 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAD23BP54727 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.88■□□□□ 0.93
RAD23BP54727 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAD23BP54727 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.88■□□□□ 0.93
RAD23BP54727 AL359736.2-201ENST00000621992 437 ntBASIC20.88■□□□□ 0.93
RAD23BP54727 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.88■□□□□ 0.93
RAD23BP54727 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.88■□□□□ 0.93
RAD23BP54727 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAD23BP54727 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.88■□□□□ 0.93
RAD23BP54727 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAD23BP54727 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.87■□□□□ 0.93
RAD23BP54727 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RAD23BP54727 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RAD23BP54727 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.87■□□□□ 0.93
RAD23BP54727 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.87■□□□□ 0.93
RAD23BP54727 KRT18P16-201ENST00000510337 1294 ntBASIC20.87■□□□□ 0.93
RAD23BP54727 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RAD23BP54727 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 TMEM191A-211ENST00000637163 1067 ntBASIC20.87■□□□□ 0.93
RAD23BP54727 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.87■□□□□ 0.93
RAD23BP54727 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
RAD23BP54727 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.87■□□□□ 0.93
RAD23BP54727 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.87■□□□□ 0.93
RAD23BP54727 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
RAD23BP54727 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAD23BP54727 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.86■□□□□ 0.93
RAD23BP54727 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.86■□□□□ 0.93
RAD23BP54727 AC110285.5-201ENST00000611501 352 ntBASIC20.86■□□□□ 0.93
RAD23BP54727 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.86■□□□□ 0.93
RAD23BP54727 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAD23BP54727 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.86■□□□□ 0.93
RAD23BP54727 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAD23BP54727 AL158211.5-201ENST00000623583 2518 ntBASIC20.85■□□□□ 0.93
RAD23BP54727 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.85■□□□□ 0.93
RAD23BP54727 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RAD23BP54727 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.85■□□□□ 0.93
RAD23BP54727 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.85■□□□□ 0.93
RAD23BP54727 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.85■□□□□ 0.93
RAD23BP54727 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.85■□□□□ 0.93
RAD23BP54727 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RAD23BP54727 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.85■□□□□ 0.93
RAD23BP54727 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.85■□□□□ 0.93
RAD23BP54727 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAD23BP54727 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.85■□□□□ 0.93
RAD23BP54727 GCSHP5-201ENST00000443090 522 ntBASIC20.85■□□□□ 0.93
RAD23BP54727 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RAD23BP54727 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.85■□□□□ 0.93
RAD23BP54727 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.85■□□□□ 0.93
RAD23BP54727 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms