Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PMS1P54277 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
PMS1P54277 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 AC004408.2-201ENST00000623613 2777 ntBASIC21.51■■□□□ 1.03
PMS1P54277 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.51■■□□□ 1.03
PMS1P54277 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PMS1P54277 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.51■■□□□ 1.03
PMS1P54277 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS1P54277 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS1P54277 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.5■■□□□ 1.03
PMS1P54277 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS1P54277 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS1P54277 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.5■■□□□ 1.03
PMS1P54277 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PMS1P54277 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS1P54277 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PMS1P54277 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PMS1P54277 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PMS1P54277 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 AC133041.1-202ENST00000642053 222 ntBASIC21.49■■□□□ 1.03
PMS1P54277 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PMS1P54277 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.49■■□□□ 1.03
PMS1P54277 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
PMS1P54277 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS1P54277 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PMS1P54277 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.48■■□□□ 1.03
PMS1P54277 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.48■■□□□ 1.03
PMS1P54277 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.48■■□□□ 1.03
PMS1P54277 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.48■■□□□ 1.03
PMS1P54277 SOX15-203ENST00000570788 1093 ntBASIC21.48■■□□□ 1.03
PMS1P54277 AC120498.8-201ENST00000614275 531 ntBASIC21.48■■□□□ 1.03
PMS1P54277 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS1P54277 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
PMS1P54277 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.48■■□□□ 1.03
PMS1P54277 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 LINC01465-201ENST00000408887 1940 ntBASIC21.47■■□□□ 1.03
PMS1P54277 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.47■■□□□ 1.03
PMS1P54277 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.47■■□□□ 1.03
PMS1P54277 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.47■■□□□ 1.03
PMS1P54277 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PMS1P54277 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PMS1P54277 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.47■■□□□ 1.03
PMS1P54277 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
PMS1P54277 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.47■■□□□ 1.03
PMS1P54277 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMS1P54277 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.47■■□□□ 1.03
PMS1P54277 TEX21P-204ENST00000641479 1693 ntBASIC21.47■■□□□ 1.03
PMS1P54277 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms