Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.78■□□□□ 0.6
CDK9P50750 AL031963.3-201ENST00000606441 850 ntBASIC18.78■□□□□ 0.6
CDK9P50750 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK9P50750 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK9P50750 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK9P50750 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CDK9P50750 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDK9P50750 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK9P50750 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CDK9P50750 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 MIPEPP3-201ENST00000412105 444 ntBASIC18.77■□□□□ 0.6
CDK9P50750 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDK9P50750 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK9P50750 C2orf69P4-201ENST00000565394 541 ntBASIC18.77■□□□□ 0.6
CDK9P50750 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK9P50750 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDK9P50750 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.59
CDK9P50750 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK9P50750 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK9P50750 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK9P50750 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 AC005332.8-201ENST00000622750 2735 ntBASIC18.76■□□□□ 0.59
CDK9P50750 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.76■□□□□ 0.59
CDK9P50750 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK9P50750 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK9P50750 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK9P50750 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK9P50750 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.76■□□□□ 0.59
CDK9P50750 MIR4758-201ENST00000577688 71 ntBASIC18.76■□□□□ 0.59
CDK9P50750 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK9P50750 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.76■□□□□ 0.59
CDK9P50750 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK9P50750 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDK9P50750 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK9P50750 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK9P50750 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK9P50750 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 TMEM179-206ENST00000616017 1645 ntBASIC18.75■□□□□ 0.59
CDK9P50750 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDK9P50750 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDK9P50750 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK9P50750 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK9P50750 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 LSM12P1-201ENST00000411836 588 ntBASIC18.75■□□□□ 0.59
CDK9P50750 AC073210.2-201ENST00000430369 194 ntBASIC18.75■□□□□ 0.59
CDK9P50750 AC069152.1-201ENST00000438030 544 ntBASIC18.75■□□□□ 0.59
CDK9P50750 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK9P50750 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.75■□□□□ 0.59
CDK9P50750 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK9P50750 AC133041.1-202ENST00000642053 222 ntBASIC18.75■□□□□ 0.59
CDK9P50750 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CDK9P50750 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDK9P50750 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK9P50750 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK9P50750 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.74■□□□□ 0.59
CDK9P50750 KRT8P20-201ENST00000423953 1409 ntBASIC18.74■□□□□ 0.59
CDK9P50750 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK9P50750 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK9P50750 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDK9P50750 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDK9P50750 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDK9P50750 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK9P50750 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK9P50750 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK9P50750 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDK9P50750 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK9P50750 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms