Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLP35914 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLP35914 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLP35914 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCLP35914 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
HMGCLP35914 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HMGCLP35914 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.49■□□□□ 0.71
HMGCLP35914 FAM197Y4-202ENST00000622692 608 ntBASIC19.49■□□□□ 0.71
HMGCLP35914 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLP35914 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HMGCLP35914 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCLP35914 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCLP35914 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.48■□□□□ 0.71
HMGCLP35914 C1QL1P1-201ENST00000568105 661 ntBASIC19.48■□□□□ 0.71
HMGCLP35914 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.48■□□□□ 0.71
HMGCLP35914 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCLP35914 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HMGCLP35914 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCLP35914 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLP35914 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HMGCLP35914 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGCLP35914 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HMGCLP35914 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HMGCLP35914 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HMGCLP35914 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGCLP35914 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HMGCLP35914 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.47■□□□□ 0.71
HMGCLP35914 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.47■□□□□ 0.71
HMGCLP35914 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGCLP35914 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCLP35914 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HMGCLP35914 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCLP35914 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
HMGCLP35914 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGCLP35914 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGCLP35914 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGCLP35914 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGCLP35914 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGCLP35914 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.46■□□□□ 0.71
HMGCLP35914 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCLP35914 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HMGCLP35914 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGCLP35914 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGCLP35914 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HMGCLP35914 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms