Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PDE6BP35913 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDE6BP35913 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.17■■□□□ 1.46
PDE6BP35913 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE6BP35913 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.17■■□□□ 1.46
PDE6BP35913 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.17■■□□□ 1.46
PDE6BP35913 VENTXP5-201ENST00000523979 775 ntBASIC24.17■■□□□ 1.46
PDE6BP35913 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.17■■□□□ 1.46
PDE6BP35913 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.17■■□□□ 1.46
PDE6BP35913 CKBP1-201ENST00000565489 1086 ntBASIC24.17■■□□□ 1.46
PDE6BP35913 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.17■■□□□ 1.46
PDE6BP35913 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.17■■□□□ 1.46
PDE6BP35913 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.17■■□□□ 1.46
PDE6BP35913 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDE6BP35913 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE6BP35913 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PDE6BP35913 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE6BP35913 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE6BP35913 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE6BP35913 AP000523.1-201ENST00000398242 1049 ntBASIC24.16■■□□□ 1.46
PDE6BP35913 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE6BP35913 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE6BP35913 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.16■■□□□ 1.46
PDE6BP35913 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE6BP35913 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PDE6BP35913 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
PDE6BP35913 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE6BP35913 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE6BP35913 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE6BP35913 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE6BP35913 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE6BP35913 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.15■■□□□ 1.46
PDE6BP35913 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.15■■□□□ 1.46
PDE6BP35913 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.15■■□□□ 1.46
PDE6BP35913 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE6BP35913 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.15■■□□□ 1.46
PDE6BP35913 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.15■■□□□ 1.46
PDE6BP35913 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PDE6BP35913 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.15■■□□□ 1.46
PDE6BP35913 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE6BP35913 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE6BP35913 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PDE6BP35913 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDE6BP35913 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 KRT8P45-201ENST00000414328 1447 ntBASIC24.14■■□□□ 1.45
PDE6BP35913 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.14■■□□□ 1.45
PDE6BP35913 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.14■■□□□ 1.45
PDE6BP35913 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.14■■□□□ 1.45
PDE6BP35913 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE6BP35913 AC012676.1-201ENST00000574705 1949 ntBASIC24.14■■□□□ 1.45
PDE6BP35913 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PDE6BP35913 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE6BP35913 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE6BP35913 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PDE6BP35913 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PDE6BP35913 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.13■■□□□ 1.45
PDE6BP35913 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.13■■□□□ 1.45
PDE6BP35913 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.13■■□□□ 1.45
PDE6BP35913 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.13■■□□□ 1.45
PDE6BP35913 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.13■■□□□ 1.45
PDE6BP35913 AL691432.3-201ENST00000621860 400 ntBASIC24.13■■□□□ 1.45
PDE6BP35913 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE6BP35913 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE6BP35913 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE6BP35913 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE6BP35913 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PDE6BP35913 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PDE6BP35913 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
PDE6BP35913 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE6BP35913 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE6BP35913 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.12■■□□□ 1.45
PDE6BP35913 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDE6BP35913 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PDE6BP35913 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE6BP35913 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE6BP35913 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.12■■□□□ 1.45
PDE6BP35913 AC112907.2-201ENST00000448639 330 ntBASIC24.12■■□□□ 1.45
PDE6BP35913 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE6BP35913 ZNF444P1-201ENST00000559497 298 ntBASIC24.12■■□□□ 1.45
PDE6BP35913 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
PDE6BP35913 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.12■■□□□ 1.45
PDE6BP35913 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.12■■□□□ 1.45
PDE6BP35913 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
PDE6BP35913 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDE6BP35913 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDE6BP35913 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms