Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AL121906.2-201ENST00000621597 723 ntBASIC20.59■□□□□ 0.89
RFC1P35251 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RFC1P35251 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RFC1P35251 AC007952.6-201ENST00000573168 2673 ntBASIC20.59■□□□□ 0.89
RFC1P35251 AC003957.1-201ENST00000625108 2673 ntBASIC20.59■□□□□ 0.89
RFC1P35251 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RFC1P35251 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RFC1P35251 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC1P35251 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
RFC1P35251 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.58■□□□□ 0.89
RFC1P35251 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RFC1P35251 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC1P35251 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.58■□□□□ 0.89
RFC1P35251 AL121829.2-201ENST00000620908 328 ntBASIC20.58■□□□□ 0.89
RFC1P35251 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC1P35251 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC1P35251 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC1P35251 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC1P35251 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFC1P35251 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC1P35251 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC1P35251 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
RFC1P35251 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RFC1P35251 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.57■□□□□ 0.88
RFC1P35251 POM121L13P-201ENST00000422362 380 ntBASIC20.57■□□□□ 0.88
RFC1P35251 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
RFC1P35251 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.57■□□□□ 0.88
RFC1P35251 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFC1P35251 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.57■□□□□ 0.88
RFC1P35251 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC1P35251 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
RFC1P35251 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFC1P35251 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RFC1P35251 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.56■□□□□ 0.88
RFC1P35251 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC1P35251 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFC1P35251 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.56■□□□□ 0.88
RFC1P35251 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
RFC1P35251 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.56■□□□□ 0.88
RFC1P35251 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.56■□□□□ 0.88
RFC1P35251 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.56■□□□□ 0.88
RFC1P35251 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RFC1P35251 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RFC1P35251 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RFC1P35251 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC1P35251 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.56■□□□□ 0.88
RFC1P35251 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC1P35251 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC1P35251 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RFC1P35251 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 AP003097.1-201ENST00000530657 1135 ntBASIC20.55■□□□□ 0.88
RFC1P35251 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.55■□□□□ 0.88
RFC1P35251 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC1P35251 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms