Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LSP1P33241 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.61■□□□□ 0.73
LSP1P33241 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.61■□□□□ 0.73
LSP1P33241 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 AC008406.3-201ENST00000620001 1374 ntBASIC19.61■□□□□ 0.73
LSP1P33241 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.61■□□□□ 0.73
LSP1P33241 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.61■□□□□ 0.73
LSP1P33241 AL512631.2-201ENST00000604634 923 ntBASIC19.61■□□□□ 0.73
LSP1P33241 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.61■□□□□ 0.73
LSP1P33241 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 TEX21P-204ENST00000641479 1693 ntBASIC19.61■□□□□ 0.73
LSP1P33241 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.61■□□□□ 0.73
LSP1P33241 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSP1P33241 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.61■□□□□ 0.73
LSP1P33241 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.61■□□□□ 0.73
LSP1P33241 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LSP1P33241 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.6■□□□□ 0.73
LSP1P33241 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.6■□□□□ 0.73
LSP1P33241 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.6■□□□□ 0.73
LSP1P33241 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LSP1P33241 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LSP1P33241 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.6■□□□□ 0.73
LSP1P33241 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.6■□□□□ 0.73
LSP1P33241 FAM21FP-204ENST00000608637 956 ntBASIC19.6■□□□□ 0.73
LSP1P33241 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.6■□□□□ 0.73
LSP1P33241 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.6■□□□□ 0.73
LSP1P33241 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSP1P33241 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
LSP1P33241 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LSP1P33241 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LSP1P33241 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LSP1P33241 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.59■□□□□ 0.73
LSP1P33241 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.59■□□□□ 0.73
LSP1P33241 AC105233.4-201ENST00000642045 216 ntBASIC19.59■□□□□ 0.73
LSP1P33241 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LSP1P33241 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LSP1P33241 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSP1P33241 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LSP1P33241 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LSP1P33241 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LSP1P33241 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.58■□□□□ 0.73
LSP1P33241 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.58■□□□□ 0.73
LSP1P33241 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSP1P33241 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
LSP1P33241 MKRN4P-201ENST00000444706 1521 ntBASIC19.58■□□□□ 0.73
LSP1P33241 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSP1P33241 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LSP1P33241 BX842568.3-201ENST00000418104 571 ntBASIC19.58■□□□□ 0.72
LSP1P33241 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSP1P33241 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.58■□□□□ 0.72
LSP1P33241 IGHV3-19-201ENST00000521488 291 ntBASIC19.58■□□□□ 0.72
LSP1P33241 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.58■□□□□ 0.72
LSP1P33241 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSP1P33241 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.58■□□□□ 0.72
LSP1P33241 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.58■□□□□ 0.72
LSP1P33241 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSP1P33241 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSP1P33241 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LSP1P33241 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSP1P33241 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LSP1P33241 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LSP1P33241 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 AL512353.2-201ENST00000448759 1962 ntBASIC19.57■□□□□ 0.72
LSP1P33241 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms