Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC6A4P31645 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.11■□□□□ 0.81
SLC6A4P31645 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SLC6A4P31645 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A4P31645 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SLC6A4P31645 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A4P31645 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC6A4P31645 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC6A4P31645 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.1■□□□□ 0.81
SLC6A4P31645 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC6A4P31645 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SLC6A4P31645 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC6A4P31645 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
SLC6A4P31645 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC6A4P31645 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A4P31645 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SLC6A4P31645 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC6A4P31645 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SLC6A4P31645 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC6A4P31645 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SLC6A4P31645 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC6A4P31645 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SLC6A4P31645 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.09■□□□□ 0.81
SLC6A4P31645 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.09■□□□□ 0.81
SLC6A4P31645 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC6A4P31645 REXO1L10P-201ENST00000615707 1290 ntBASIC20.09■□□□□ 0.81
SLC6A4P31645 REXO1L12P-201ENST00000622156 912 ntBASIC20.09■□□□□ 0.81
SLC6A4P31645 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.09■□□□□ 0.81
SLC6A4P31645 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC6A4P31645 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A4P31645 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC6A4P31645 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A4P31645 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC6A4P31645 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SLC6A4P31645 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC6A4P31645 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC6A4P31645 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC6A4P31645 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A4P31645 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A4P31645 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A4P31645 AC004980.1-204ENST00000429707 299 ntBASIC20.08■□□□□ 0.81
SLC6A4P31645 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.08■□□□□ 0.81
SLC6A4P31645 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A4P31645 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.08■□□□□ 0.81
SLC6A4P31645 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC6A4P31645 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC6A4P31645 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.08■□□□□ 0.81
SLC6A4P31645 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A4P31645 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC6A4P31645 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A4P31645 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A4P31645 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A4P31645 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A4P31645 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC6A4P31645 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC6A4P31645 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A4P31645 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC6A4P31645 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A4P31645 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms