Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.99■□□□□ 0.95
CD58P19256 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.99■□□□□ 0.95
CD58P19256 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.99■□□□□ 0.95
CD58P19256 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.99■□□□□ 0.95
CD58P19256 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.99■□□□□ 0.95
CD58P19256 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.99■□□□□ 0.95
CD58P19256 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.99■□□□□ 0.95
CD58P19256 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.99■□□□□ 0.95
CD58P19256 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CD58P19256 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD58P19256 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.98■□□□□ 0.95
CD58P19256 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.98■□□□□ 0.95
CD58P19256 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.98■□□□□ 0.95
CD58P19256 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CD58P19256 AC124016.1-201ENST00000609552 612 ntBASIC20.98■□□□□ 0.95
CD58P19256 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CD58P19256 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CD58P19256 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
CD58P19256 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.98■□□□□ 0.95
CD58P19256 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CD58P19256 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CD58P19256 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD58P19256 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
CD58P19256 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CD58P19256 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.97■□□□□ 0.95
CD58P19256 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 YBX1P10-201ENST00000444752 975 ntBASIC20.97■□□□□ 0.95
CD58P19256 AC098590.1-201ENST00000468126 897 ntBASIC20.97■□□□□ 0.95
CD58P19256 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.97■□□□□ 0.95
CD58P19256 RPPH1-201ENST00000516869 333 ntBASIC20.97■□□□□ 0.95
CD58P19256 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.97■□□□□ 0.95
CD58P19256 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CD58P19256 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CD58P19256 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD58P19256 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.97■□□□□ 0.95
CD58P19256 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.97■□□□□ 0.95
CD58P19256 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.97■□□□□ 0.95
CD58P19256 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.96■□□□□ 0.95
CD58P19256 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.96■□□□□ 0.95
CD58P19256 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CD58P19256 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CD58P19256 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.96■□□□□ 0.95
CD58P19256 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.96■□□□□ 0.95
CD58P19256 TMEM191A-211ENST00000637163 1067 ntBASIC20.96■□□□□ 0.95
CD58P19256 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD58P19256 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CD58P19256 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CD58P19256 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD58P19256 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD58P19256 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.95■□□□□ 0.94
CD58P19256 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD58P19256 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.95■□□□□ 0.94
CD58P19256 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.95■□□□□ 0.94
CD58P19256 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CD58P19256 AL158047.1-201ENST00000445918 881 ntBASIC20.95■□□□□ 0.94
CD58P19256 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.95■□□□□ 0.94
CD58P19256 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.95■□□□□ 0.94
CD58P19256 AL359736.2-201ENST00000621992 437 ntBASIC20.95■□□□□ 0.94
CD58P19256 FAM197Y4-202ENST00000622692 608 ntBASIC20.95■□□□□ 0.94
CD58P19256 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD58P19256 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CD58P19256 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.95■□□□□ 0.94
CD58P19256 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms