Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCP1P13796 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.62■□□□□ 0.89
LCP1P13796 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LCP1P13796 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCP1P13796 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
LCP1P13796 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCP1P13796 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.61■□□□□ 0.89
LCP1P13796 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.61■□□□□ 0.89
LCP1P13796 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 TUBB8P6-201ENST00000436895 1288 ntBASIC20.61■□□□□ 0.89
LCP1P13796 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.61■□□□□ 0.89
LCP1P13796 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.61■□□□□ 0.89
LCP1P13796 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LCP1P13796 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.61■□□□□ 0.89
LCP1P13796 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCP1P13796 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
LCP1P13796 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LCP1P13796 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.6■□□□□ 0.89
LCP1P13796 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.6■□□□□ 0.89
LCP1P13796 KRT16P5-201ENST00000455284 522 ntBASIC20.6■□□□□ 0.89
LCP1P13796 KRT18P16-201ENST00000510337 1294 ntBASIC20.6■□□□□ 0.89
LCP1P13796 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LCP1P13796 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.6■□□□□ 0.89
LCP1P13796 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LCP1P13796 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCP1P13796 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LCP1P13796 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCP1P13796 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.59■□□□□ 0.89
LCP1P13796 UBE2SP1-201ENST00000450587 669 ntBASIC20.59■□□□□ 0.89
LCP1P13796 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LCP1P13796 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCP1P13796 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCP1P13796 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LCP1P13796 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.58■□□□□ 0.89
LCP1P13796 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.58■□□□□ 0.89
LCP1P13796 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.58■□□□□ 0.89
LCP1P13796 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
LCP1P13796 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.58■□□□□ 0.89
LCP1P13796 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LCP1P13796 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LCP1P13796 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LCP1P13796 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
LCP1P13796 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LCP1P13796 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.57■□□□□ 0.88
LCP1P13796 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LCP1P13796 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.57■□□□□ 0.88
LCP1P13796 SLC25A24-204ENST00000569674 2357 ntBASIC20.57■□□□□ 0.88
LCP1P13796 AL158211.5-201ENST00000623583 2518 ntBASIC20.57■□□□□ 0.88
LCP1P13796 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.57■□□□□ 0.88
LCP1P13796 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.57■□□□□ 0.88
LCP1P13796 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LCP1P13796 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LCP1P13796 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LCP1P13796 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.57■□□□□ 0.88
LCP1P13796 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.57■□□□□ 0.88
LCP1P13796 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.57■□□□□ 0.88
LCP1P13796 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.57■□□□□ 0.88
LCP1P13796 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.57■□□□□ 0.88
LCP1P13796 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.57■□□□□ 0.88
LCP1P13796 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
LCP1P13796 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
LCP1P13796 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LCP1P13796 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms