Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.06■□□□□ 0.48
UBL4AP11441 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.06■□□□□ 0.48
UBL4AP11441 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.06■□□□□ 0.48
UBL4AP11441 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBL4AP11441 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBL4AP11441 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBL4AP11441 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UBL4AP11441 AC008687.6-201ENST00000596318 630 ntBASIC18.06■□□□□ 0.48
UBL4AP11441 AL121906.2-201ENST00000621597 723 ntBASIC18.06■□□□□ 0.48
UBL4AP11441 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.06■□□□□ 0.48
UBL4AP11441 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.06■□□□□ 0.48
UBL4AP11441 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBL4AP11441 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBL4AP11441 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.06■□□□□ 0.48
UBL4AP11441 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBL4AP11441 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL4AP11441 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UBL4AP11441 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBL4AP11441 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL4AP11441 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBL4AP11441 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBL4AP11441 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
UBL4AP11441 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.05■□□□□ 0.48
UBL4AP11441 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 UNC93B5-201ENST00000530315 699 ntBASIC18.05■□□□□ 0.48
UBL4AP11441 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.05■□□□□ 0.48
UBL4AP11441 AC120498.8-201ENST00000614275 531 ntBASIC18.05■□□□□ 0.48
UBL4AP11441 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL4AP11441 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.05■□□□□ 0.48
UBL4AP11441 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
UBL4AP11441 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL4AP11441 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL4AP11441 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL4AP11441 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 TFP1-202ENST00000475455 1573 ntBASIC18.04■□□□□ 0.48
UBL4AP11441 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 UNC93B4-201ENST00000505679 747 ntBASIC18.04■□□□□ 0.48
UBL4AP11441 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.04■□□□□ 0.48
UBL4AP11441 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL4AP11441 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL4AP11441 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL4AP11441 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UBL4AP11441 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.03■□□□□ 0.48
UBL4AP11441 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
UBL4AP11441 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms