Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNB1P11230 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.86■□□□□ 0.77
CHRNB1P11230 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNB1P11230 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNB1P11230 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNB1P11230 AC092338.2-201ENST00000568827 1415 ntBASIC19.85■□□□□ 0.77
CHRNB1P11230 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 PHGDH-210ENST00000641115 1638 ntBASIC19.85■□□□□ 0.77
CHRNB1P11230 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHRNB1P11230 KRT18P56-201ENST00000507275 550 ntBASIC19.85■□□□□ 0.77
CHRNB1P11230 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNB1P11230 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.85■□□□□ 0.77
CHRNB1P11230 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.85■□□□□ 0.77
CHRNB1P11230 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHRNB1P11230 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNB1P11230 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNB1P11230 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNB1P11230 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNB1P11230 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNB1P11230 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNB1P11230 AC009947.2-201ENST00000444014 672 ntBASIC19.84■□□□□ 0.77
CHRNB1P11230 AC092647.4-201ENST00000457211 535 ntBASIC19.84■□□□□ 0.77
CHRNB1P11230 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNB1P11230 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.84■□□□□ 0.77
CHRNB1P11230 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.84■□□□□ 0.77
CHRNB1P11230 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 AL023803.3-201ENST00000615559 522 ntBASIC19.84■□□□□ 0.77
CHRNB1P11230 AC011558.1-201ENST00000623459 338 ntBASIC19.84■□□□□ 0.77
CHRNB1P11230 AC141257.4-201ENST00000634557 245 ntBASIC19.84■□□□□ 0.77
CHRNB1P11230 AC136944.6-201ENST00000634818 245 ntBASIC19.84■□□□□ 0.77
CHRNB1P11230 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.84■□□□□ 0.77
CHRNB1P11230 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CHRNB1P11230 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNB1P11230 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CHRNB1P11230 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHRNB1P11230 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNB1P11230 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNB1P11230 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNB1P11230 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.83■□□□□ 0.77
CHRNB1P11230 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CHRNB1P11230 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNB1P11230 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNB1P11230 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.83■□□□□ 0.77
CHRNB1P11230 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNB1P11230 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNB1P11230 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNB1P11230 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNB1P11230 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.83■□□□□ 0.77
CHRNB1P11230 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNB1P11230 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CHRNB1P11230 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNB1P11230 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNB1P11230 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.83■□□□□ 0.76
CHRNB1P11230 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNB1P11230 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CHRNB1P11230 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNB1P11230 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.83■□□□□ 0.76
CHRNB1P11230 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.83■□□□□ 0.76
CHRNB1P11230 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CHRNB1P11230 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNB1P11230 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNB1P11230 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNB1P11230 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNB1P11230 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNB1P11230 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHRNB1P11230 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNB1P11230 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNB1P11230 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNB1P11230 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNB1P11230 FAM86EP-206ENST00000510506 987 ntBASIC19.82■□□□□ 0.76
CHRNB1P11230 KRT126P-201ENST00000549467 1181 ntBASIC19.82■□□□□ 0.76
CHRNB1P11230 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.82■□□□□ 0.76
CHRNB1P11230 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms