Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 AC092720.2-201ENST00000602388 1665 ntBASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNYL3P0C7X3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 FAM210CP-201ENST00000445714 574 ntBASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 CD177P1-201ENST00000606252 935 ntBASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 AL031963.3-201ENST00000606441 850 ntBASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 AC133561.5-201ENST00000635547 218 ntBASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 AL512408.1-201ENST00000569378 2000 ntBASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNYL3P0C7X3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNYL3P0C7X3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNYL3P0C7X3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCNYL3P0C7X3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNYL3P0C7X3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.83■□□□□ 0.61
CCNYL3P0C7X3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 AL355075.4-201ENST00000554988 638 ntBASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.83■□□□□ 0.6
CCNYL3P0C7X3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 AP002982.1-201ENST00000492365 877 ntBASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 AP003071.4-201ENST00000562276 1284 ntBASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 AC073195.1-201ENST00000607241 877 ntBASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNYL3P0C7X3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNYL3P0C7X3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNYL3P0C7X3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
CCNYL3P0C7X3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNYL3P0C7X3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNYL3P0C7X3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNYL3P0C7X3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms