Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC1P07992 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC1P07992 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC1P07992 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC1P07992 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC1P07992 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
ERCC1P07992 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ERCC1P07992 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
ERCC1P07992 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC1P07992 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.3■□□□□ 0.36
ERCC1P07992 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ERCC1P07992 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 AL158211.5-201ENST00000623583 2518 ntBASIC17.3■□□□□ 0.36
ERCC1P07992 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
ERCC1P07992 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC1P07992 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ERCC1P07992 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC1P07992 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC1P07992 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ERCC1P07992 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC1P07992 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ERCC1P07992 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
ERCC1P07992 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ERCC1P07992 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC1P07992 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.29■□□□□ 0.36
ERCC1P07992 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.29■□□□□ 0.36
ERCC1P07992 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC1P07992 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.29■□□□□ 0.36
ERCC1P07992 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.29■□□□□ 0.36
ERCC1P07992 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ERCC1P07992 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ERCC1P07992 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC1P07992 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ERCC1P07992 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.28■□□□□ 0.36
ERCC1P07992 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ERCC1P07992 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.28■□□□□ 0.36
ERCC1P07992 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ERCC1P07992 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERCC1P07992 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.27■□□□□ 0.36
ERCC1P07992 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC1P07992 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC1P07992 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.27■□□□□ 0.36
ERCC1P07992 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC1P07992 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.27■□□□□ 0.36
ERCC1P07992 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC1P07992 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC1P07992 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms