Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MT-ND1P03886 TERF1P5-201ENST00000477545 1207 ntBASIC18.41■□□□□ 0.54
MT-ND1P03886 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.41■□□□□ 0.54
MT-ND1P03886 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND1P03886 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND1P03886 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MT-ND1P03886 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MT-ND1P03886 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND1P03886 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
MT-ND1P03886 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MT-ND1P03886 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MT-ND1P03886 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND1P03886 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MT-ND1P03886 PGM5P4-201ENST00000421970 445 ntBASIC18.4■□□□□ 0.54
MT-ND1P03886 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.4■□□□□ 0.54
MT-ND1P03886 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND1P03886 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 AC010536.3-201ENST00000620306 533 ntBASIC18.4■□□□□ 0.54
MT-ND1P03886 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND1P03886 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND1P03886 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND1P03886 KRT8P17-201ENST00000453110 1448 ntBASIC18.4■□□□□ 0.54
MT-ND1P03886 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.4■□□□□ 0.54
MT-ND1P03886 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
MT-ND1P03886 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MT-ND1P03886 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
MT-ND1P03886 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MT-ND1P03886 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
MT-ND1P03886 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 AC009113.1-201ENST00000570267 2443 ntBASIC18.39■□□□□ 0.53
MT-ND1P03886 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
MT-ND1P03886 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND1P03886 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.39■□□□□ 0.53
MT-ND1P03886 AL591742.1-201ENST00000604433 565 ntBASIC18.39■□□□□ 0.53
MT-ND1P03886 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MT-ND1P03886 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MT-ND1P03886 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MT-ND1P03886 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 CYP21A1P-202ENST00000354927 1481 ntBASIC18.39■□□□□ 0.53
MT-ND1P03886 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND1P03886 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND1P03886 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
MT-ND1P03886 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 KRT18P11-201ENST00000435214 1283 ntBASIC18.38■□□□□ 0.53
MT-ND1P03886 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
MT-ND1P03886 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms