Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.01■■□□□ 1.43
COL4A1P02462 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.01■■□□□ 1.43
COL4A1P02462 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.01■■□□□ 1.43
COL4A1P02462 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
COL4A1P02462 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.01■■□□□ 1.43
COL4A1P02462 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL4A1P02462 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.01■■□□□ 1.43
COL4A1P02462 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.01■■□□□ 1.43
COL4A1P02462 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
COL4A1P02462 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL4A1P02462 AC092338.2-201ENST00000568827 1415 ntBASIC24.01■■□□□ 1.43
COL4A1P02462 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL4A1P02462 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL4A1P02462 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL4A1P02462 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL4A1P02462 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
COL4A1P02462 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
COL4A1P02462 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24■■□□□ 1.43
COL4A1P02462 AC092667.1-201ENST00000434301 2586 ntBASIC24■■□□□ 1.43
COL4A1P02462 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24■■□□□ 1.43
COL4A1P02462 AC139887.4-201ENST00000607877 719 ntBASIC24■■□□□ 1.43
COL4A1P02462 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
COL4A1P02462 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL4A1P02462 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
COL4A1P02462 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
COL4A1P02462 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24■■□□□ 1.43
COL4A1P02462 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.99■■□□□ 1.43
COL4A1P02462 AC128688.1-201ENST00000487626 519 ntBASIC23.99■■□□□ 1.43
COL4A1P02462 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.99■■□□□ 1.43
COL4A1P02462 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.99■■□□□ 1.43
COL4A1P02462 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
COL4A1P02462 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
COL4A1P02462 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
COL4A1P02462 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
COL4A1P02462 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.99■■□□□ 1.43
COL4A1P02462 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL4A1P02462 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.98■■□□□ 1.43
COL4A1P02462 LIN28AP1-201ENST00000429574 405 ntBASIC23.98■■□□□ 1.43
COL4A1P02462 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.98■■□□□ 1.43
COL4A1P02462 AC087388.1-201ENST00000571370 1112 ntBASIC23.98■■□□□ 1.43
COL4A1P02462 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL4A1P02462 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.98■■□□□ 1.43
COL4A1P02462 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.97■■□□□ 1.43
COL4A1P02462 AL160286.2-201ENST00000567150 934 ntBASIC23.97■■□□□ 1.43
COL4A1P02462 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.97■■□□□ 1.43
COL4A1P02462 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
COL4A1P02462 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.97■■□□□ 1.43
COL4A1P02462 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.97■■□□□ 1.43
COL4A1P02462 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.97■■□□□ 1.43
COL4A1P02462 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL4A1P02462 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
COL4A1P02462 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
COL4A1P02462 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.96■■□□□ 1.43
COL4A1P02462 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.96■■□□□ 1.43
COL4A1P02462 AL031133.1-201ENST00000406807 723 ntBASIC23.96■■□□□ 1.43
COL4A1P02462 FAM8A6P-201ENST00000407496 1135 ntBASIC23.96■■□□□ 1.43
COL4A1P02462 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.96■■□□□ 1.43
COL4A1P02462 ATP5G1P1-201ENST00000448724 379 ntBASIC23.96■■□□□ 1.43
COL4A1P02462 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
COL4A1P02462 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.96■■□□□ 1.43
COL4A1P02462 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.96■■□□□ 1.43
COL4A1P02462 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.96■■□□□ 1.43
COL4A1P02462 AL358472.4-201ENST00000633140 710 ntBASIC23.96■■□□□ 1.43
COL4A1P02462 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
COL4A1P02462 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
COL4A1P02462 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL4A1P02462 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.43
COL4A1P02462 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
COL4A1P02462 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.95■■□□□ 1.43
COL4A1P02462 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms