Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRACP01848 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 GPX1-201ENST00000419349 1106 ntBASIC12.73□□□□□ -0.37
TRACP01848 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRACP01848 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC12.73□□□□□ -0.37
TRACP01848 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.73□□□□□ -0.37
TRACP01848 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC12.73□□□□□ -0.37
TRACP01848 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.73□□□□□ -0.37
TRACP01848 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.73□□□□□ -0.37
TRACP01848 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.73□□□□□ -0.37
TRACP01848 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 AC139713.2-201ENST00000641328 2723 ntBASIC12.73□□□□□ -0.37
TRACP01848 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRACP01848 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.73□□□□□ -0.37
TRACP01848 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.73□□□□□ -0.37
TRACP01848 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRACP01848 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.72□□□□□ -0.37
TRACP01848 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.72□□□□□ -0.37
TRACP01848 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.72□□□□□ -0.37
TRACP01848 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRACP01848 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRACP01848 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
TRACP01848 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.72□□□□□ -0.37
TRACP01848 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.72□□□□□ -0.37
TRACP01848 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TRACP01848 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.72□□□□□ -0.37
TRACP01848 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRACP01848 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
TRACP01848 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRACP01848 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TRACP01848 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
TRACP01848 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.71□□□□□ -0.37
TRACP01848 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.71□□□□□ -0.37
TRACP01848 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRACP01848 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
TRACP01848 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.71□□□□□ -0.38
TRACP01848 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TRACP01848 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
TRACP01848 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC12.71□□□□□ -0.38
TRACP01848 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRACP01848 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRACP01848 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRACP01848 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms