Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.51■□□□□ 0.87
TRUB2O95900 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.51■□□□□ 0.87
TRUB2O95900 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.51■□□□□ 0.87
TRUB2O95900 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB2O95900 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB2O95900 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB2O95900 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.51■□□□□ 0.87
TRUB2O95900 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB2O95900 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRUB2O95900 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.5■□□□□ 0.87
TRUB2O95900 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.5■□□□□ 0.87
TRUB2O95900 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.5■□□□□ 0.87
TRUB2O95900 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.5■□□□□ 0.87
TRUB2O95900 AC110285.5-201ENST00000611501 352 ntBASIC20.5■□□□□ 0.87
TRUB2O95900 FAM197Y4-202ENST00000622692 608 ntBASIC20.5■□□□□ 0.87
TRUB2O95900 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.5■□□□□ 0.87
TRUB2O95900 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB2O95900 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRUB2O95900 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TRUB2O95900 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRUB2O95900 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
TRUB2O95900 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.49■□□□□ 0.87
TRUB2O95900 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
TRUB2O95900 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRUB2O95900 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRUB2O95900 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.49■□□□□ 0.87
TRUB2O95900 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.49■□□□□ 0.87
TRUB2O95900 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.49■□□□□ 0.87
TRUB2O95900 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.49■□□□□ 0.87
TRUB2O95900 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRUB2O95900 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.48■□□□□ 0.87
TRUB2O95900 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.48■□□□□ 0.87
TRUB2O95900 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRUB2O95900 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.48■□□□□ 0.87
TRUB2O95900 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.48■□□□□ 0.87
TRUB2O95900 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.48■□□□□ 0.87
TRUB2O95900 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRUB2O95900 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRUB2O95900 AC007952.6-201ENST00000573168 2673 ntBASIC20.48■□□□□ 0.87
TRUB2O95900 AC003957.1-201ENST00000625108 2673 ntBASIC20.48■□□□□ 0.87
TRUB2O95900 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.48■□□□□ 0.87
TRUB2O95900 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
TRUB2O95900 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.47■□□□□ 0.87
TRUB2O95900 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 AC093484.2-201ENST00000580996 2166 ntBASIC20.47■□□□□ 0.87
TRUB2O95900 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.47■□□□□ 0.87
TRUB2O95900 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.47■□□□□ 0.87
TRUB2O95900 YBX1P10-201ENST00000444752 975 ntBASIC20.47■□□□□ 0.87
TRUB2O95900 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.47■□□□□ 0.87
TRUB2O95900 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRUB2O95900 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRUB2O95900 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRUB2O95900 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRUB2O95900 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms