Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNOT4O95628 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT4O95628 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CNOT4O95628 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNOT4O95628 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNOT4O95628 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNOT4O95628 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNOT4O95628 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.35■□□□□ 0.37
CNOT4O95628 AC233702.5-201ENST00000584107 538 ntBASIC17.35■□□□□ 0.37
CNOT4O95628 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.35■□□□□ 0.37
CNOT4O95628 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.35■□□□□ 0.37
CNOT4O95628 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CNOT4O95628 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CNOT4O95628 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT4O95628 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CNOT4O95628 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT4O95628 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT4O95628 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CNOT4O95628 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT4O95628 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CNOT4O95628 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CNOT4O95628 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 RPS2P55-201ENST00000397318 883 ntBASIC17.34■□□□□ 0.37
CNOT4O95628 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.34■□□□□ 0.37
CNOT4O95628 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 AC107956.1-201ENST00000494359 873 ntBASIC17.34■□□□□ 0.37
CNOT4O95628 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CNOT4O95628 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT4O95628 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 AL353708.3-201ENST00000610272 989 ntBASIC17.34■□□□□ 0.37
CNOT4O95628 AC010331.1-201ENST00000611423 582 ntBASIC17.34■□□□□ 0.37
CNOT4O95628 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CNOT4O95628 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT4O95628 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT4O95628 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT4O95628 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.33■□□□□ 0.37
CNOT4O95628 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT4O95628 AC009237.14-201ENST00000609975 1594 ntBASIC17.33■□□□□ 0.37
CNOT4O95628 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT4O95628 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.33■□□□□ 0.37
CNOT4O95628 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNOT4O95628 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.33■□□□□ 0.36
CNOT4O95628 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT4O95628 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT4O95628 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT4O95628 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNOT4O95628 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT4O95628 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.33■□□□□ 0.36
CNOT4O95628 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT4O95628 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT4O95628 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms