Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.14■■□□□ 1.62
PTCD1O75127 YBX1P2-201ENST00000489612 999 ntBASIC25.14■■□□□ 1.62
PTCD1O75127 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PTCD1O75127 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PTCD1O75127 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
PTCD1O75127 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
PTCD1O75127 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.13■■□□□ 1.61
PTCD1O75127 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 RNF152P1-201ENST00000397754 604 ntBASIC25.13■■□□□ 1.61
PTCD1O75127 UPK3BP1-201ENST00000428678 509 ntBASIC25.13■■□□□ 1.61
PTCD1O75127 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.13■■□□□ 1.61
PTCD1O75127 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.13■■□□□ 1.61
PTCD1O75127 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.13■■□□□ 1.61
PTCD1O75127 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PTCD1O75127 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCD1O75127 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
PTCD1O75127 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PTCD1O75127 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PTCD1O75127 AC092338.2-201ENST00000568827 1415 ntBASIC25.12■■□□□ 1.61
PTCD1O75127 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PTCD1O75127 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PTCD1O75127 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.12■■□□□ 1.61
PTCD1O75127 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PTCD1O75127 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.12■■□□□ 1.61
PTCD1O75127 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
PTCD1O75127 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.12■■□□□ 1.61
PTCD1O75127 LINC01238-205ENST00000567549 1107 ntBASIC25.12■■□□□ 1.61
PTCD1O75127 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.12■■□□□ 1.61
PTCD1O75127 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.12■■□□□ 1.61
PTCD1O75127 MYC-208ENST00000641036 567 ntBASIC25.12■■□□□ 1.61
PTCD1O75127 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.12■■□□□ 1.61
PTCD1O75127 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
PTCD1O75127 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PTCD1O75127 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PTCD1O75127 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PTCD1O75127 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.11■■□□□ 1.61
PTCD1O75127 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.11■■□□□ 1.61
PTCD1O75127 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PTCD1O75127 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PTCD1O75127 FAM8A6P-201ENST00000407496 1135 ntBASIC25.11■■□□□ 1.61
PTCD1O75127 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.11■■□□□ 1.61
PTCD1O75127 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PTCD1O75127 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.11■■□□□ 1.61
PTCD1O75127 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.11■■□□□ 1.61
PTCD1O75127 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.11■■□□□ 1.61
PTCD1O75127 AL023803.3-201ENST00000615559 522 ntBASIC25.11■■□□□ 1.61
PTCD1O75127 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.11■■□□□ 1.61
PTCD1O75127 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PTCD1O75127 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 AL031133.1-201ENST00000406807 723 ntBASIC25.1■■□□□ 1.61
PTCD1O75127 TSPY5P-201ENST00000426936 936 ntBASIC25.1■■□□□ 1.61
PTCD1O75127 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.1■■□□□ 1.61
PTCD1O75127 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PTCD1O75127 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.1■■□□□ 1.61
PTCD1O75127 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PTCD1O75127 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.09■■□□□ 1.61
PTCD1O75127 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PTCD1O75127 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.09■■□□□ 1.61
PTCD1O75127 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
PTCD1O75127 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.09■■□□□ 1.61
PTCD1O75127 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.09■■□□□ 1.61
PTCD1O75127 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.09■■□□□ 1.61
PTCD1O75127 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.09■■□□□ 1.61
PTCD1O75127 AC010653.2-201ENST00000623505 997 ntBASIC25.09■■□□□ 1.61
PTCD1O75127 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.09■■□□□ 1.61
PTCD1O75127 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PTCD1O75127 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PTCD1O75127 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PTCD1O75127 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PTCD1O75127 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PTCD1O75127 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PTCD1O75127 COX11P1-201ENST00000489116 835 ntBASIC25.08■■□□□ 1.61
PTCD1O75127 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.08■■□□□ 1.61
PTCD1O75127 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.08■■□□□ 1.61
PTCD1O75127 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.08■■□□□ 1.61
PTCD1O75127 AC091076.1-201ENST00000610741 619 ntBASIC25.08■■□□□ 1.61
PTCD1O75127 AC011558.1-201ENST00000623459 338 ntBASIC25.08■■□□□ 1.61
PTCD1O75127 AC141257.4-201ENST00000634557 245 ntBASIC25.08■■□□□ 1.61
PTCD1O75127 AC136944.6-201ENST00000634818 245 ntBASIC25.08■■□□□ 1.61
PTCD1O75127 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.08■■□□□ 1.61
PTCD1O75127 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PTCD1O75127 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PTCD1O75127 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms