Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
OPHN1O60890 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.36■□□□□ 0.85
OPHN1O60890 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.36■□□□□ 0.85
OPHN1O60890 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OPHN1O60890 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.36■□□□□ 0.85
OPHN1O60890 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
OPHN1O60890 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.35■□□□□ 0.85
OPHN1O60890 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 AC233263.1-201ENST00000578059 224 ntBASIC20.35■□□□□ 0.85
OPHN1O60890 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
OPHN1O60890 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.35■□□□□ 0.85
OPHN1O60890 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
OPHN1O60890 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.35■□□□□ 0.85
OPHN1O60890 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.35■□□□□ 0.85
OPHN1O60890 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.35■□□□□ 0.85
OPHN1O60890 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OPHN1O60890 AC009237.14-201ENST00000609975 1594 ntBASIC20.34■□□□□ 0.85
OPHN1O60890 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.34■□□□□ 0.85
OPHN1O60890 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.34■□□□□ 0.85
OPHN1O60890 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.34■□□□□ 0.85
OPHN1O60890 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.34■□□□□ 0.85
OPHN1O60890 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
OPHN1O60890 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.34■□□□□ 0.85
OPHN1O60890 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
OPHN1O60890 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.34■□□□□ 0.85
OPHN1O60890 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.34■□□□□ 0.85
OPHN1O60890 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.34■□□□□ 0.85
OPHN1O60890 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OPHN1O60890 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.34■□□□□ 0.85
OPHN1O60890 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.34■□□□□ 0.85
OPHN1O60890 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
OPHN1O60890 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.33■□□□□ 0.85
OPHN1O60890 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
OPHN1O60890 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.33■□□□□ 0.84
OPHN1O60890 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
OPHN1O60890 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OPHN1O60890 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.33■□□□□ 0.84
OPHN1O60890 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OPHN1O60890 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OPHN1O60890 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OPHN1O60890 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
OPHN1O60890 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.32■□□□□ 0.84
OPHN1O60890 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
OPHN1O60890 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
OPHN1O60890 POM121L13P-201ENST00000422362 380 ntBASIC20.32■□□□□ 0.84
OPHN1O60890 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.32■□□□□ 0.84
OPHN1O60890 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
OPHN1O60890 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.32■□□□□ 0.84
OPHN1O60890 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.32■□□□□ 0.84
OPHN1O60890 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPHN1O60890 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.32■□□□□ 0.84
OPHN1O60890 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
OPHN1O60890 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
OPHN1O60890 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
OPHN1O60890 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.31■□□□□ 0.84
OPHN1O60890 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms