Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.94■□□□□ 0.14
SSSCA1O60232 MIR939-201ENST00000401314 82 ntBASIC15.94■□□□□ 0.14
SSSCA1O60232 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 AC091305.1-201ENST00000479476 895 ntBASIC15.94■□□□□ 0.14
SSSCA1O60232 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.94■□□□□ 0.14
SSSCA1O60232 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 AC096631.2-201ENST00000436136 790 ntBASIC15.93■□□□□ 0.14
SSSCA1O60232 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.93■□□□□ 0.14
SSSCA1O60232 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.93■□□□□ 0.14
SSSCA1O60232 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.93■□□□□ 0.14
SSSCA1O60232 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SSSCA1O60232 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SSSCA1O60232 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 AC018470.1-201ENST00000624790 3129 ntBASIC15.93■□□□□ 0.14
SSSCA1O60232 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.93■□□□□ 0.14
SSSCA1O60232 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.93■□□□□ 0.14
SSSCA1O60232 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 KRT8P17-201ENST00000453110 1448 ntBASIC15.93■□□□□ 0.14
SSSCA1O60232 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSSCA1O60232 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.92■□□□□ 0.14
SSSCA1O60232 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.92■□□□□ 0.14
SSSCA1O60232 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.92■□□□□ 0.14
SSSCA1O60232 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.92■□□□□ 0.14
SSSCA1O60232 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.92■□□□□ 0.14
SSSCA1O60232 AC106739.1-201ENST00000617035 715 ntBASIC15.92■□□□□ 0.14
SSSCA1O60232 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.92■□□□□ 0.14
SSSCA1O60232 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SSSCA1O60232 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SSSCA1O60232 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.92■□□□□ 0.14
SSSCA1O60232 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSSCA1O60232 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms