Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.25■□□□□ 0.99
EXTL3O43909 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.25■□□□□ 0.99
EXTL3O43909 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
EXTL3O43909 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.24■□□□□ 0.99
EXTL3O43909 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.24■□□□□ 0.99
EXTL3O43909 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
EXTL3O43909 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.24■□□□□ 0.99
EXTL3O43909 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
EXTL3O43909 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
EXTL3O43909 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
EXTL3O43909 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.24■□□□□ 0.99
EXTL3O43909 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.24■□□□□ 0.99
EXTL3O43909 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
EXTL3O43909 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.24■□□□□ 0.99
EXTL3O43909 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EXTL3O43909 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
EXTL3O43909 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.24■□□□□ 0.99
EXTL3O43909 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.23■□□□□ 0.99
EXTL3O43909 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.23■□□□□ 0.99
EXTL3O43909 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
EXTL3O43909 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
EXTL3O43909 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.23■□□□□ 0.99
EXTL3O43909 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.23■□□□□ 0.99
EXTL3O43909 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.23■□□□□ 0.99
EXTL3O43909 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.23■□□□□ 0.99
EXTL3O43909 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
EXTL3O43909 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
EXTL3O43909 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
EXTL3O43909 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.23■□□□□ 0.99
EXTL3O43909 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.23■□□□□ 0.99
EXTL3O43909 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EXTL3O43909 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.22■□□□□ 0.99
EXTL3O43909 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.22■□□□□ 0.99
EXTL3O43909 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.22■□□□□ 0.99
EXTL3O43909 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.22■□□□□ 0.99
EXTL3O43909 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
EXTL3O43909 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.22■□□□□ 0.99
EXTL3O43909 RARRES2P10-201ENST00000564312 460 ntBASIC21.22■□□□□ 0.99
EXTL3O43909 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.22■□□□□ 0.99
EXTL3O43909 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
EXTL3O43909 HTR7P1-201ENST00000538670 1336 ntBASIC21.22■□□□□ 0.99
EXTL3O43909 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EXTL3O43909 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
EXTL3O43909 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.21■□□□□ 0.99
EXTL3O43909 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.21■□□□□ 0.99
EXTL3O43909 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
EXTL3O43909 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.21■□□□□ 0.99
EXTL3O43909 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.21■□□□□ 0.99
EXTL3O43909 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.21■□□□□ 0.99
EXTL3O43909 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.21■□□□□ 0.99
EXTL3O43909 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
EXTL3O43909 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 AL158211.5-201ENST00000623583 2518 ntBASIC21.21■□□□□ 0.99
EXTL3O43909 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms