Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ITM2AO43736 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITM2AO43736 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ITM2AO43736 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.16■□□□□ 0.66
ITM2AO43736 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.16■□□□□ 0.66
ITM2AO43736 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ITM2AO43736 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ITM2AO43736 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ITM2AO43736 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITM2AO43736 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ITM2AO43736 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
ITM2AO43736 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.15■□□□□ 0.66
ITM2AO43736 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ITM2AO43736 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ITM2AO43736 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.15■□□□□ 0.66
ITM2AO43736 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.15■□□□□ 0.66
ITM2AO43736 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ITM2AO43736 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
ITM2AO43736 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITM2AO43736 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.15■□□□□ 0.66
ITM2AO43736 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.15■□□□□ 0.66
ITM2AO43736 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.14■□□□□ 0.66
ITM2AO43736 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.14■□□□□ 0.66
ITM2AO43736 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITM2AO43736 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITM2AO43736 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.14■□□□□ 0.66
ITM2AO43736 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.14■□□□□ 0.66
ITM2AO43736 AC141586.3-201ENST00000562166 1838 ntBASIC19.14■□□□□ 0.65
ITM2AO43736 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
ITM2AO43736 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ITM2AO43736 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.14■□□□□ 0.65
ITM2AO43736 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ITM2AO43736 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.14■□□□□ 0.65
ITM2AO43736 AC023632.3-201ENST00000521633 145 ntBASIC19.14■□□□□ 0.65
ITM2AO43736 DUX4L16-201ENST00000555130 1264 ntBASIC19.14■□□□□ 0.65
ITM2AO43736 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.14■□□□□ 0.65
ITM2AO43736 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ITM2AO43736 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ITM2AO43736 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITM2AO43736 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.14■□□□□ 0.65
ITM2AO43736 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.14■□□□□ 0.65
ITM2AO43736 AC018553.1-201ENST00000616682 1458 ntBASIC19.14■□□□□ 0.65
ITM2AO43736 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITM2AO43736 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ITM2AO43736 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ITM2AO43736 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITM2AO43736 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ITM2AO43736 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.13■□□□□ 0.65
ITM2AO43736 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.13■□□□□ 0.65
ITM2AO43736 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.13■□□□□ 0.65
ITM2AO43736 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.13■□□□□ 0.65
ITM2AO43736 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 AC011767.1-201ENST00000617410 1153 ntBASIC19.13■□□□□ 0.65
ITM2AO43736 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.13■□□□□ 0.65
ITM2AO43736 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITM2AO43736 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms