Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXS1O43638 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
FOXS1O43638 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FOXS1O43638 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXS1O43638 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXS1O43638 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXS1O43638 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXS1O43638 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXS1O43638 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 KRT16P1-201ENST00000399124 1418 ntBASIC18.43■□□□□ 0.54
FOXS1O43638 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXS1O43638 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXS1O43638 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXS1O43638 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXS1O43638 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXS1O43638 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXS1O43638 MIR4785-201ENST00000585005 73 ntBASIC18.43■□□□□ 0.54
FOXS1O43638 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 AC026471.5-201ENST00000615068 467 ntBASIC18.43■□□□□ 0.54
FOXS1O43638 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
FOXS1O43638 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXS1O43638 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXS1O43638 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXS1O43638 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXS1O43638 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXS1O43638 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXS1O43638 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXS1O43638 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXS1O43638 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FOXS1O43638 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.42■□□□□ 0.54
FOXS1O43638 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.42■□□□□ 0.54
FOXS1O43638 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXS1O43638 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 AC125437.2-201ENST00000625180 2167 ntBASIC18.42■□□□□ 0.54
FOXS1O43638 KRT17P2-201ENST00000300992 1314 ntBASIC18.42■□□□□ 0.54
FOXS1O43638 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXS1O43638 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXS1O43638 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXS1O43638 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXS1O43638 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXS1O43638 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXS1O43638 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXS1O43638 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 AC004980.1-204ENST00000429707 299 ntBASIC18.41■□□□□ 0.54
FOXS1O43638 TSPY15P-201ENST00000457163 923 ntBASIC18.41■□□□□ 0.54
FOXS1O43638 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 NUDT16P1-203ENST00000513809 620 ntBASIC18.41■□□□□ 0.54
FOXS1O43638 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.41■□□□□ 0.54
FOXS1O43638 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXS1O43638 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.41■□□□□ 0.54
FOXS1O43638 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXS1O43638 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXS1O43638 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXS1O43638 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXS1O43638 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXS1O43638 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXS1O43638 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXS1O43638 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXS1O43638 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FOXS1O43638 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms