Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNN4O15554 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNN4O15554 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNN4O15554 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.09■□□□□ 0.81
KCNN4O15554 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNN4O15554 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNN4O15554 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KCNN4O15554 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KCNN4O15554 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KCNN4O15554 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KCNN4O15554 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNN4O15554 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.08■□□□□ 0.81
KCNN4O15554 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNN4O15554 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.08■□□□□ 0.81
KCNN4O15554 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNN4O15554 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNN4O15554 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.08■□□□□ 0.81
KCNN4O15554 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.08■□□□□ 0.8
KCNN4O15554 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
KCNN4O15554 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 AP000974.1-201ENST00000623909 2387 ntBASIC20.08■□□□□ 0.8
KCNN4O15554 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.08■□□□□ 0.8
KCNN4O15554 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
KCNN4O15554 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNN4O15554 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
KCNN4O15554 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KCNN4O15554 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
KCNN4O15554 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
KCNN4O15554 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
KCNN4O15554 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KCNN4O15554 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNN4O15554 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.07■□□□□ 0.8
KCNN4O15554 PNMA6B-201ENST00000538162 1200 ntBASIC20.07■□□□□ 0.8
KCNN4O15554 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.07■□□□□ 0.8
KCNN4O15554 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNN4O15554 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNN4O15554 AC083880.1-201ENST00000608266 535 ntBASIC20.07■□□□□ 0.8
KCNN4O15554 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
KCNN4O15554 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
KCNN4O15554 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KCNN4O15554 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNN4O15554 AC120498.9-201ENST00000339021 3867 ntBASIC20.07■□□□□ 0.8
KCNN4O15554 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNN4O15554 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KCNN4O15554 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 BX323043.1-201ENST00000641006 1765 ntBASIC20.06■□□□□ 0.8
KCNN4O15554 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KCNN4O15554 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KCNN4O15554 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNN4O15554 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KCNN4O15554 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.06■□□□□ 0.8
KCNN4O15554 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 AC060766.5-201ENST00000590539 871 ntBASIC20.06■□□□□ 0.8
KCNN4O15554 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.06■□□□□ 0.8
KCNN4O15554 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KCNN4O15554 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KCNN4O15554 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNN4O15554 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KCNN4O15554 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNN4O15554 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNN4O15554 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
KCNN4O15554 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.05■□□□□ 0.8
KCNN4O15554 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNN4O15554 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNN4O15554 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNN4O15554 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNN4O15554 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms