Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.25■□□□□ 0.51
AP3D1O14617 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.25■□□□□ 0.51
AP3D1O14617 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.25■□□□□ 0.51
AP3D1O14617 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
AP3D1O14617 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.24■□□□□ 0.51
AP3D1O14617 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 AC004408.2-201ENST00000623613 2777 ntBASIC18.24■□□□□ 0.51
AP3D1O14617 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
AP3D1O14617 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
AP3D1O14617 GPX1P1-201ENST00000388829 606 ntBASIC18.24■□□□□ 0.51
AP3D1O14617 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.24■□□□□ 0.51
AP3D1O14617 TSPY6P-201ENST00000448518 926 ntBASIC18.24■□□□□ 0.51
AP3D1O14617 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.24■□□□□ 0.51
AP3D1O14617 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.24■□□□□ 0.51
AP3D1O14617 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
AP3D1O14617 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
AP3D1O14617 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
AP3D1O14617 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.24■□□□□ 0.51
AP3D1O14617 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3D1O14617 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
AP3D1O14617 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
AP3D1O14617 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
AP3D1O14617 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
AP3D1O14617 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.23■□□□□ 0.51
AP3D1O14617 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
AP3D1O14617 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.23■□□□□ 0.51
AP3D1O14617 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.23■□□□□ 0.51
AP3D1O14617 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
AP3D1O14617 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3D1O14617 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 SLC29A4P1-201ENST00000398760 971 ntBASIC18.22■□□□□ 0.51
AP3D1O14617 DUSP5P2-201ENST00000426873 1033 ntBASIC18.22■□□□□ 0.51
AP3D1O14617 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.22■□□□□ 0.51
AP3D1O14617 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.22■□□□□ 0.51
AP3D1O14617 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
AP3D1O14617 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms