Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.94■□□□□ 0.94
FOXN3O00409 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXN3O00409 AC008403.3-201ENST00000598924 454 ntBASIC20.94■□□□□ 0.94
FOXN3O00409 AL121829.2-201ENST00000620908 328 ntBASIC20.94■□□□□ 0.94
FOXN3O00409 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXN3O00409 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN3O00409 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXN3O00409 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXN3O00409 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXN3O00409 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXN3O00409 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXN3O00409 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
FOXN3O00409 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
FOXN3O00409 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXN3O00409 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
FOXN3O00409 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN3O00409 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXN3O00409 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
FOXN3O00409 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXN3O00409 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN3O00409 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.92■□□□□ 0.94
FOXN3O00409 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN3O00409 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN3O00409 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXN3O00409 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN3O00409 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
FOXN3O00409 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN3O00409 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN3O00409 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXN3O00409 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.91■□□□□ 0.94
FOXN3O00409 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.91■□□□□ 0.94
FOXN3O00409 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FOXN3O00409 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN3O00409 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
FOXN3O00409 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN3O00409 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 AC098818.2-201ENST00000564925 2320 ntBASIC20.91■□□□□ 0.94
FOXN3O00409 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.91■□□□□ 0.94
FOXN3O00409 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN3O00409 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN3O00409 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
FOXN3O00409 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXN3O00409 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN3O00409 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXN3O00409 POM121L13P-201ENST00000422362 380 ntBASIC20.9■□□□□ 0.94
FOXN3O00409 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
FOXN3O00409 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXN3O00409 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXN3O00409 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXN3O00409 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXN3O00409 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN3O00409 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
FOXN3O00409 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN3O00409 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN3O00409 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN3O00409 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
FOXN3O00409 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.89■□□□□ 0.94
FOXN3O00409 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
FOXN3O00409 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXN3O00409 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FOXN3O00409 AC018445.3-201ENST00000624177 1945 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms