Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 CROCCP3-202ENST00000420820 1947 ntBASIC18.05■□□□□ 0.48
TNFRSF11BO00300 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TNFRSF11BO00300 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.04■□□□□ 0.48
TNFRSF11BO00300 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 AL161938.1-201ENST00000569833 2180 ntBASIC18.04■□□□□ 0.48
TNFRSF11BO00300 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF11BO00300 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TNFRSF11BO00300 MIR638-201ENST00000385237 100 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms