Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 HLA-A-201ENST00000376802 1334 ntBASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 RASA4DP-201ENST00000460726 1199 ntBASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.83■■□□□ 1.25
TMEM88BA6NKF7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 MIR574-201ENST00000385209 96 ntBASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 KRT18P31-201ENST00000506277 1292 ntBASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 KRT8P26-201ENST00000534154 1276 ntBASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 AF228730.7-201ENST00000641842 219 ntBASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 KRT16P6-202ENST00000425692 1426 ntBASIC22.82■■□□□ 1.24
TMEM88BA6NKF7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 FAM220CP-201ENST00000395253 831 ntBASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 CHCHD2P8-201ENST00000429873 447 ntBASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 AL121912.1-201ENST00000603683 238 ntBASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.81■■□□□ 1.24
TMEM88BA6NKF7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 MIR1233-2-201ENST00000408138 82 ntBASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 MIR1233-1-201ENST00000408722 82 ntBASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 AC034232.1-201ENST00000506026 1064 ntBASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 FOSL1P1-201ENST00000511041 816 ntBASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 AL160286.2-201ENST00000567150 934 ntBASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TMEM88BA6NKF7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TMEM88BA6NKF7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms