Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 ESPNP-201ENST00000270691 2015 ntBASIC13.81□□□□□ -0.2
LINC01546A6NGU7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 IRX1P1-201ENST00000438849 1838 ntBASIC13.81□□□□□ -0.2
LINC01546A6NGU7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 CDV3P1-201ENST00000471403 739 ntBASIC13.81□□□□□ -0.2
LINC01546A6NGU7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 AC012414.1-201ENST00000556676 535 ntBASIC13.81□□□□□ -0.2
LINC01546A6NGU7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 MIR4466-201ENST00000606121 54 ntBASIC13.81□□□□□ -0.2
LINC01546A6NGU7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01546A6NGU7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 AC079140.4-201ENST00000507448 529 ntBASIC13.8□□□□□ -0.2
LINC01546A6NGU7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 TSPY26P-201ENST00000476365 1326 ntBASIC13.8□□□□□ -0.2
LINC01546A6NGU7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 AC073592.3-201ENST00000625118 1834 ntBASIC13.8□□□□□ -0.2
LINC01546A6NGU7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01546A6NGU7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ANO7L1-203ENST00000602586 1720 ntBASIC13.79□□□□□ -0.2
LINC01546A6NGU7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 CCDC92B-201ENST00000575506 885 ntBASIC13.79□□□□□ -0.2
LINC01546A6NGU7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms